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Mr Sean Bechhofer - publications

List of publications

2015

2014

  • Belhajjame, K., Zhao, J., Garijo, D., Hettne, K., Palma, R., Corcho, O., ... Goble, C. (2014). The Research Object Suite of Ontologies: Sharing and Exchanging Research Data and Methods on the Open Web. Journal of Web Semantics. . Publication link: 264931ca-51af-4602-8903-97375aeb3cf7
  • Bechhofer, S. (2014). Computational Analysis of the Live Music Archive. Poster session presented at ISMIR2014, 15th International Society for Music Information Retrieval Conference, Tapei, Taiwan, .. Publication link: a6f50fef-321f-4912-a74c-385776e9925c
  • Hettne, K., Dharuri, H., Zhao, J., Wolstencroft, K., Belhajjame, K., Soiland-Reyes, S., ... Roos, M. (2014). Structuring research methods and data with the research object model: genomics workflows as a case study. Journal of Biomedical Semantics, 5(1). DOI: 10.1186/2041-1480-5-41. Publication link: 6a2f3f49-e226-4c2c-aaa4-9325a85f2a39
  • Harth, A., & Bechhofer, S. (2014). The Semantic Web Challenge 2013. Journal of Web Semantics, 27-28, 1-1. DOI: http://dx.doi.org/10.1016/j.websem.2014.08.001. Publication link: 5b5c1c6f-04bb-416e-b1ca-2e912ee01ccb

2013

  • Bechhofer, S., Sierman, B., Jones, C., & Elstrøm, G. (2013). Preservation Policy Levels in SCAPE. In host publication.. Publication link: d3ed2d09-6c25-4cd2-95d6-b45ec6b20ec3
  • Baker, T., Bechhofer, S., Isaac, A., Miles, A., Schreiber, G., & Summers, E. (2013). Key choices in the design of Simple Knowledge Organization System (SKOS). Web Semantics, 20, 35-49. DOI: 10.1016/j.websem.2013.05.001. Publication link: cf23d8d0-8802-47cb-873f-0875b5b9b421
  • Bechhofer, S., Page, K., & De Roure, D. (2013). Hello cleveland! Linked data publication of live music archives. In International Workshop on Image Analysis for Multimedia Interactive Services|Int. Workshop Image Analysis Multimedia Interact. Serv.. IEEE. DOI: 10.1109/WIAMIS.2013.6616155. Publication link: 3438a3b7-c112-4103-a496-0ede5626a37e
  • Bechhofer, S., Buchan, I., De Roure, D., Missier, P., Ainsworth, J., Bhagat, J., ... Goble, C. (2013). Why linked data is not enough for scientists. Future Generation Computer Systems, 29(2), 599-611. DOI: 10.1016/j.future.2011.08.004. Publication link: 479e591e-b295-4478-b0c7-a145c19dcd45
  • Bechhofer, S., Kulovits, H., Kraxner, M., Plangg, M., & Becker, C. (2013). Open Preservation Data: Controlled vocabularies and ontologies for preservation ecosystems. In host publication.. Publication link: 1e254d3e-a075-4fce-b31d-b4cbe74f61a6

2012

  • Abdul Manaf, N. A., Bechhofer, S., & Stevens, R. (2012). The current state of SKOS vocabularies on the web. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 7295, pp. 270-284). (Lecture Notes in Computer Science (LNCS)). Springer Verlag. DOI: 10.1007/978-3-642-30284-8_25. Publication link: 992a0781-8adb-44e5-ac04-154b9530af87
  • Manaf, N. A. A., Bechhofer, S., & Stevens, R. (2012). Common Modelling Slips in SKOS Vocabularies. In Proceedings of OWL: Experiences and Directions Workshop 2012, Heraklion, Crete, Greece, May 27-28, 2012. (Vol. 849). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: 7bb5eeec-6e4c-4e94-8d5a-51f90090b235
  • Bechhofer, S., Belhajjame, K., Corcho, O., Garijo, D., Zhao, J., Missier, P., ... Goble, C. (2012). Workflow-Centric Research Objects: A First Class Citizen in the Scholarly Discourse. In host publication.. Publication link: 70e18a02-90aa-48af-bc39-7cb414573ee0
  • Belhajjame, K., Corcho, O., Garijo, D., Zhao, J., Missier, P., Newman, D., ... Goble, C. A. (2012). Workflow-centric research objects: First class citizens in scholarly discourse. In CEUR Workshop Proceedings|CEUR Workshop Proc.. (Vol. 903, pp. 1-12). Publication link: 495a31b2-e409-4ad2-83f6-c9997d652005
  • Hettne, K., Soiland-Reyes, S., Klyne, G., Belhajjame, K., Gamble, M., Bechhofer, S., ... Corcho, O. (2012). Workflow forever: Semantic Web Semantic models and tools for preserving and digitally publishing computational experiments. In ACM International Conference Proceeding Series|ACM Int. Conf. Proc. Ser.. (pp. 36-37). (SWAT4LS '11). ACM. DOI: 10.1145/2166896.2166909. Publication link: 4a0cccc2-2263-448a-ae32-ca82c5621d25
  • Goble, C., De Roure, D., & Bechhofer, S. (2012). Accelerating scientists' knowledge turns. In 3rd International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management. (LNCS). Springer Verlag. . Publication link: bd19d8de-8cc0-4d52-a2d4-d5836cea997d
  • Belhajjame, K., Corcho, O., Garijo, D., Zhao, J., Missier, P., Newman, D., ... Goble, C. A. (2012). Workflow-centric research objects: First class citizens in scholarly discourse. CEUR Workshop Proceedings, 903, 1-12. . Publication link: caa26ab5-715a-43e6-92e0-4f94b7106b86

2011

  • Lunn, D., Harper, S., & Bechhofer, S. (2011). Identifying behavioral strategies of visually impaired users to improve access to web content. ACM Transactions on Accessible Computing, 3(4), [13]. DOI: 10.1145/1952388.1952390. Publication link: f0711012-4a83-4dbf-9e78-0fae5cfbf94a
  • Horridge, M., & Bechhofer, S. (2011). The OWL API: A Java API for OWL ontologies. Semantic Web, 2(1), 11-21. DOI: 10.3233/SW-2011-0025. Publication link: fd31597f-3d48-4df2-aaf3-39e0ed40d95a
  • Bechhofer, S. (2011). Research Objects: Towards Exchange and Reuse of Digital Objects. CERN Workshop on Innovations in Scholarly Communication (OAI7), Geneva, Switzerland, .. Publication link: 0d86bfe1-6dce-491a-8273-152696bf469c
  • De Roure, D., Bechhofer, S., Goble, C., & Newman, D. (2011). Scientific social objects: The social objects and multidimensional network of the my experiment website. In Proceedings - 2011 IEEE International Conference on Privacy, Security, Risk and Trust and IEEE International Conference on Social Computing, PASSAT/SocialCom 2011|Proc. - IEEE Int. Conf. Priv., Secur., Risk Trust IEEE Int. Conf. Soc. Comput., PASSAT/SocialCom. (pp. 1398-1402). DOI: 10.1109/PASSAT/SocialCom.2011.245. Publication link: 85ef4dd7-fe57-4b70-9936-72ab5df35531

2010

  • Manaf, N. A. A., Bechhofer, S., & Stevens, R. (2010). A survey of identifiers and labels in OWL ontologies. In CEUR Workshop Proceedings|CEUR Workshop Proc.. (Vol. 614). (CEUR Workshop Proceedings - OWLED 2010). CEUR-WS.org. . Publication link: 6765b0f6-b323-448e-b4d9-a4ee3b249427
  • De Roure, D., Goble, C., Aleksejevs, S., Bechhofer, S., Bhagat, J., Cruickshank, D., ... Zhao, J. (2010). The evolution of myExperiment. In Proceedings - 2010 6th IEEE International Conference on e-Science, eScience 2010|Proc. - IEEE Int. Conf. e-Sci., eScience. (pp. 153-160). IEEE Computer Society. DOI: 10.1109/eScience.2010.59. Publication link: 8e2fe2db-874a-4852-a317-4e348226328a
  • Singh, R., Bechhofer, S., Belhajjame, K., & Embury, S. M. (2010). Automatically identifying bounds on semantic annotations for bioinformatics web service input parameters. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 6385, pp. 232-243). (Lecture Notes in Computer Science). Springer Verlag. DOI: 10.1007/978-3-642-16985-4_21. Publication link: 12715dda-dc18-4aef-b596-c01a021cd4c7
  • Missier, P., Wolstencroft, K., Tanoh, F., Li, P., Bechhofer, S., Belhajjame, K., ... Goble, C. (2010). Functional units: Abstractions for Web service annotations. In Proceedings - 2010 6th World Congress on Services, Services-1 2010|Proc. - World Congr. Serv., Serv.. (pp. 306-313). IEEE Computer Society. DOI: 10.1109/SERVICES.2010.21. Publication link: 278fb195-f2f0-4757-9959-67e147dac889
  • Bechhofer, S., Ainsworth, J., Bhagat, J., Buchan, I., Couch, P., Cruickshank, D., ... Sufi, S. (2010). Why linked data is not enough for scientists. Proceedings - 2010 6th IEEE International Conference on e-Science, eScience 2010, 300-307. [5693931]. DOI: 10.1109/eScience.2010.21. Publication link: 35409f3d-71bf-42d8-aef7-864c21493346
  • Bechhofer, S., Ainsworth, J., Bhagat, J., Buchan, I., Couch, P., Cruickshank, D., ... Sufi, S. (2010). Why linked data is not enough for scientists. In Proceedings - 2010 6th IEEE International Conference on e-Science, eScience 2010|Proc. - IEEE Int. Conf. e-Sci., eScience. (pp. 300-307). IEEE Computer Society. DOI: 10.1109/eScience.2010.21. Publication link: 394d2487-5598-4e1e-a0c1-d67ad65d7947
  • Bechhofer, S. (2010). SKOS: Past, Present and Future. Extended Semantic Web Conference, Heraklion, Greece, .. Publication link: 3fa7f233-b4d6-4799-acc1-08ac3cc0368f
  • De Roure, D., Goble, C., Aleksejevs, S., Bechhofer, S., Bhagat, J., Cruickshank, D., ... Poschen, M. (2010). Towards open science: The myExperiment approach. Concurrency and Computation: Practice & Experience, 22(17), 2335-2353. DOI: 10.1002/cpe.1601. Publication link: cb6a5424-4df3-4d8d-8ba3-ff6d83ff9018
  • Birkin, M., Procter, R., Allan, R., Bechhofer, S., Buchan, I., Goble, C., ... Sinnott, R. (2010). Elements of a computational infrastructure for social simulation. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 368(1925), 3797-3812. DOI: 10.1098/rsta.2010.0145. Publication link: c802276f-1054-49de-a37f-d63a8ca968b4
  • Roos, M., Bechhofer, S., Zhao, J., Missier, P., Newman, D. R., De Roure, D., & Marshall, M. S. (2010). A linked data approach to sharing workflows and workflow results. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 6415, pp. 340-354). (Lecture Notes in Computer Sciencec). Springer Verlag. DOI: 10.1007/978-3-642-16558-0_29. Publication link: c27819df-f965-4235-a5d3-5e0b03fe859f
  • Buchan, I., Bechhofer, S., De Roure, D., Gamble, M., & Goble, C. (2010). Research Objects: Towards Exchange and Reuse of Digital Knowledge. In host publication. http://precedings.nature.com/documents/4626/version/1: Nature Precedings. DOI: 10.1038/npre.2010.4626.1. Publication link: f2167044-aa9a-4a15-86c1-9c6a9f32e62c
  • Goble, C. A., Bhagat, J., Aleksejevs, S., Cruickshank, D., Michaelides, D., Newman, D., ... de Roure, D. (2010). myExperiment: A repository and social network for the sharing of bioinformatics workflows. Nucleic acids research., 38(2), W677-W682. [gkq429]. DOI: 10.1093/nar/gkq429. Publication link: e1176ada-6cab-4e65-9467-57d9b9ff3705

2009

  • Bechhofer, S., Özsu, M. T. (Ed.), & Liu, L. (Ed.) (2009). OWL: Web Ontology Language. In {Encyclopedia of Database Systems}. (Reference). Springer Verlag. . Publication link: bf1681ca-a76c-4bdc-a642-008bb33b3bba
  • Horridge, M., & Bechhofer, S. (2009). The OWL API: A java API for working with OWL 2 ontologies. In CEUR Workshop Proceedings|CEUR Workshop Proc.. (Vol. 529). Publication link: ccb8ee61-b165-4e1d-b31e-ab955d5c45c4
  • Buchan, I., Sufi, S., Thew, S., Dunlop, I., Hiroeh, U., Canoy, D., ... Goble, C. (2009). Obesity e-Lab: Connecting Social Science via Research Objects. In host publication.. Publication link: 4030a506-ba67-495c-981d-5f8f877404b8
  • Newman, D. R., Bechhofer, S., & De Roure, D. (2009). MyExperiment: An ontology for e-Research. In CEUR Workshop Proceedings|CEUR Workshop Proc.. (Vol. 523). Publication link: 1c58553b-1c32-4f28-a442-625fc05e081e
  • Birkin, M., Allan, R., Bechhofer, S., Buchan, I., Finch, J., Goble, C., ... Sinnott, R. (2009). The Elements of a Computational Infrastructure for Social Simulation. In host publication.. Publication link: 1c4a6bc1-451c-4cf6-802a-ec458819d8cb
  • Lunn, D., Harper, S., Bechhofer, S., Sloan, D. (Ed.), Asakawa, C. (Ed.), & Takagi, H. (Ed.) (2009). Combining SADIe and AxsJAX to improve the accessibility of web content. In D. Sloan, C. Asakawa, & H. Takagi (Eds.), W4A. (pp. 75-78). (ACM International Conference Proceeding Series). ACM. . Publication link: 2045169b-441b-486d-8744-29eb71dca1f0
  • Bechhofer, S., Paton, N., Özsu, M. T. (Ed.), & Liu, L. (Ed.) (2009). Ontology Visual Querying. In {Encyclopedia of Database Systems}. (Reference). Springer Verlag. . Publication link: 27f513b4-018e-4baa-a1d3-5d298a74ed24
  • Miles, A., & Bechhofer, S. (2009). SKOS Simple Knowledge Organization System Reference. (W3C Recommendation). http://www.w3.org/TR/skos-reference/: World Wide Web Consortium.. Publication link: 8e3f54f0-9cd0-481b-9d82-6939a5d596a9
  • De Roure, D., Goble, C., Aleksejevs, S., Bechhofer, S., Bhagat, J., Cruickshank, D., ... Newman, D. (2009). The myExperiment Open Repository for Scientific Workflows. In host publication.. Publication link: 8ec37d5a-50af-4577-b6d9-c5f36e8f0124
  • Jupp, S., Bechhofer, S., & Stevens, R. (2009). A flexible API and editor for SKOS. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 5554, pp. 506-520). (Lecture Notes in Computer Science). Springer Verlag. DOI: 10.1007/978-3-642-02121-3_38. Publication link: 80b7975a-7ef9-4347-8f50-58ec01506408

2008

  • Liebig, T., Luther, M., Noppens, O., Rodriguez, M., Calvanese, D., Wessel, M., ... Sattler, U. (Ed.) (2008). OWLlink: DIG for OWL 2. In C. Dolbear, A. Ruttenberg, & U. Sattler (Eds.), OWLED. (Vol. 432). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: c5c636a8-9d7e-406b-823f-efc6eaf318f9
  • Horrocks, I., Bechhofer, S., Harper, S. (Ed.), & Yesilada, Y. (Ed.) (2008). Semantic Web. In Web Accessibility: A Foundation for Research. (1st ed.). (Human-Computer Interaction Series). Springer Verlag. DOI: 10.1007/978-1-84800-050-6_19. Publication link: cb31c86c-8578-4e6b-adbe-744e4c88769f
  • Yesilada, Y., Bechhofer, S., & Horan, B. (2008). Dynamic linking of web resources: Customisation and personalisation. In Studies in Computational Intelligence|Stud. Comput. Intell.. (Vol. 93, pp. 1-24). (Studies in Computational Intelligence; Vol. 93). Springer Verlag. DOI: 10.1007/978-3-540-76361_1. Publication link: 1765c3cb-8324-4f31-b9c1-4d38b19f2f07
  • Jupp, S., Bechhofer, S., Stevens, R., Dolbear, C. (Ed.), Ruttenberg, A. (Ed.), & Sattler, U. (Ed.) (2008). SKOS with OWL: Don't be Full-ish! In C. Dolbear, A. Ruttenberg, & U. Sattler (Eds.), OWLED. (Vol. 432). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: 04e5ccf0-2186-40bb-8e20-585276be2257
  • Bechhofer, S., Hauswirth, M., Hoffmann, J., & Koubarakis, M. (Eds.) (2008). The Semantic Web: Research and Applications, 5th European Semantic Web Conference, ESWC 2008, Tenerife, Canary Islands, Spain, June 1-5, 2008, Proceedings. In Lecture Notes in Computer Science. (Vol. 5021). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: aa673605-db32-4f75-ba01-08d448acf1c5
  • Jupp, S., Stevens, R., Bechhofer, S., Yesilada, Y., & Kostkova, P. (2008). Knowledge Representation for Web Navigation. In host publication.. Publication link: 920e0528-2719-40e2-b98d-9331f3aa9a7c
  • Lunn, D., Bechhofer, S., & Harper, S. (2008). The SADIe transcoding platform. In W4A'08: Proceedings of the 2008 International Cross-Disciplinary Conference on Web Accessibility, W4A|W4A: Proc. Int. Cross-Discip. Conf. Web Accessibility, W4A. (pp. 128-129). (ACM International Conference Proceeding Series). ACM. DOI: 10.1145/1368044.1368073. Publication link: 62eaa0af-5721-48df-849d-f1abd756c52f
  • Bechhofer, S., Jupp, S., Bechofer, S., & Stevens, R. (2008). A flexible API and editor for SKOS. Poster session presented at 7th International Semantic Web Conference, ISWC 2008, Karlsruhe, .. Publication link: 56eaa80e-a021-48a9-b6a0-a662d17444f0
  • Bechhofer, S., Yesilada, Y., Stevens, R., Jupp, S., & Horan, B. (2008). Using ontologies and vocabularies for dynamic linking. IEEE Internet Computing, 12(3), 32-39. DOI: 10.1109/MIC.2008.68. Publication link: 718da015-23c7-42e2-a809-fe637b15deda

2007

  • Corcho, O., Alper, P., Missier, P., Bechhofer, S., & Goble, C. (2007). Grid metadata management: requirements and architecture. In Proceedings - IEEE/ACM International Workshop on Grid Computing|Proc. IEEE ACM Int. Workshop Grid Comput.. (pp. 97-104). IEEE. DOI: 10.1109/GRID.2007.4354121. Publication link: 65fa1f4b-6b99-468e-892d-646477b8ad9c
  • Aranguren, M. E., Bechhofer, S., Lord, P., Sattler, U., & Stevens, R. (2007). Understanding and using the meaning of statements in a bio-ontology: Recasting the Gene Ontology in OWL. BMC Bioinformatics, 8, [57]. DOI: 10.1186/1471-2105-8-57. Publication link: 9de5d804-c7ca-4207-b2f0-891fab4a9272
  • Corcho, O., Alper, P., Missier, P., Bechhofer, S., Goble, C., & Xing, W. (2007). Metadata management in S-OGSA. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 4488, pp. 712-719). Springer-Verlag Berlin. . Publication link: 23a92e5b-e276-4983-b12b-945ead67f28a
  • Jupp, S., Stevens, R., Bechhofer, S., Kostkova, P., & Yesilada, Y. (2007). Document navigation: Ontology or Knowledge Organisation System? In host publication.. Publication link: dde3204e-5575-4c85-ae57-8a9d1bba442f
  • Jupp, S., Bechhofer, S., Kostkova, P., Steven, R., & Yesilada, Y. (2007). Converting Ontologies to Knowledge Organisation Systems for Document Navigation. In host publication.. Publication link: f804ea99-bf54-4d32-8397-cb05715a7e07
  • Horridge, M., Bechhofer, S., & Noppens, O. (2007). Igniting the OWL 1.1 touch paper: The OWL API. In CEUR Workshop Proceedings|CEUR Workshop Proc.. (Vol. 258). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: c4e122bd-805b-41c3-813a-e1f1ef172184

2006

  • Bechhofer, S., Yesilada, Y., Horan, B., & Goble, C. (2006). Knowledge-driven hyperlinks: Linking in the wild. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 4018, pp. 1-10). (Lecture Notes in Computer Science). Springer Verlag. DOI: 10.1007/11768012_1. Publication link: 93132a9b-6bc2-415f-aa99-bc3f56e52f02
  • Corcho, O., Alper, P., Kotsiopoulos, I., Missier, P., Bechhofer, S., Goble, C., & Corcho Garcia, O. (2006). An overview of S-OGSA: A Reference Semantic Grid Architecture. Web Semantics, 4(2), 102-115. DOI: 10.1016/j.websem.2006.03.001. Publication link: a4b3fd1c-4865-41ba-9357-27b4026d186c
  • Bechhofer, S. K., Stevens, R. D., & Lord, P. W. (2006). GOHSE: Ontology driven linking of biology resources. Web Semantics, 4(3), 155-163. DOI: 10.1016/j.websem.2005.09.003. Publication link: a9e31bbc-2c28-4d14-a72f-90f9cdc44eac
  • Turhan, A. Y., Bechhofer, S., Kaplunova, A., Liebig, T., Luther, M., Möller, R., ... Weithöner, T. (2006). DIG 2.0 - Towards a flexible interface for description logic reasoners. In CEUR Workshop Proceedings|CEUR Workshop Proc.. (Vol. 216). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: 04715c51-19ae-4485-b8c6-77a0b5953988
  • Yesilada, Y., Bechhofer, S., & Horan, B. (2006). Personalised dynamic links on the Web. In Proceedings - SMAP 2006: 1st International Workshop on Semantic Media Adaptation and Personalization|Proc. SMAP Int. Workshop Semantic Media Adapt. Pers.. (pp. 7-12). DOI: 10.1109/SMAP.2006.26. Publication link: 021cffcc-a9c2-46fe-a2f8-10b09e50e2cc
  • Bechhofer, S., Harper, S., & Lunn, D. (2006). SADIe: Semantic annotation for accessibility. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 4273, pp. 101-115). (Lecture Notes in Computer Science). Springer Verlag. DOI: 10.1007/11926078_8. Publication link: c11df961-af95-4d02-a132-907776a1ab92
  • Harper, S., Bechhofer, S., & Lunn, D. (2006). Taming the inaccessible web. In ACM SIGDOC 2006 - Proceedings of the 24th ACM International Conference on Design of Communication|ACM SIGDOC - Proc. ACM Int. Conf. Des. Commun.. (pp. 64-69). ACM. DOI: 10.1145/1166324.1166340. Publication link: e76d556f-5fd2-40b0-aeea-4d3fd82835b9

2005

  • Goble, C., Stevens, R., & Bechhofer, S. (2005). The semantic web and knowledge grids. Drug Discovery Today: Technologies, 2(3), 225-233. DOI: 10.1016/j.ddtec.2005.08.005. Publication link: 5669d2d0-1942-49c5-92a6-db75e0fc6fa8
  • Goble, C., & Bechhofer, S. (2005). OntoGrid: A Semantic Grid Reference Architecture. CTWatch Quarterly, 1(4). . Publication link: 2bd575d9-8d71-47c8-bff7-1a9e4ee37c31
  • Horrocks, I., Patel-Schneider, P. F., Bechhofer, S., & Tsarkov, D. (2005). OWL rules: A proposal and prototype implementation. Web Semantics, 3(1), 23-40. DOI: 10.1016/j.websem.2005.05.003. Publication link: 690b82c1-7f78-4c48-b9e2-d719ddead43a
  • Kotsiopoulos, I., Missier, P., Alper, P., Corcho, O., Bechhofer, S., Goble, C., ... Dikaiakos, M. D. (Ed.) (2005). Architectural patterns for the Semantic Grid. In D. Talia, A. Bilas, & M. D. Dikaiakos (Eds.), Workshop on Knowledge and Data Management in Grids. (pp. 119-134). Springer Verlag. . Publication link: aacc4437-6ded-417d-ab1b-865ffaa95d7c
  • Harper, S., & Bechhofer, S. (2005). Semantic triage for increased Web accessibility. IBM Systems Journal, 44(3), 637-648. DOI: 10.1147/sj.443.0637. Publication link: e691f9b7-73dc-4ac0-bd3d-ea5bc392a202
  • Cregan, A., Mochol, M., Vrandecic, D., & Bechhofer, S. (2005). Pushing the limits of OWL, rules and protege a simple example. In CEUR Workshop Proceedings|CEUR Workshop Proc.. (Vol. 188). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: dbbd1147-a180-4fe0-952c-ef54333f4eaf
  • Bechhofer, S. K., Stevens, R. D., & Lord, P. W. (2005). Ontology driven dynamic linking of biology resources. In Proceedings of the Pacific Symposium on Biocomputing 2005, PSB 2005|Proc. Pac. Symp. Biocomputing, PSB. (pp. 79-90). World Scientific Publishing. . Publication link: b82a714c-2273-4c8c-a5fc-f1f1f5a56acf
  • Bechhofer, S., Horrocks, I., & Turi, D. (2005). The OWL instance store: System description. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 3632, pp. 177-181). (Lecture Notes in Computer Science). Springer Verlag. DOI: 10.1007/11532231_13. Publication link: cd205102-e2bb-4ab7-92c3-819bbbb9d296

2004

  • Zhao, J., Goble, C., Stevens, R., Bechhofer, S., & Bouzeghoub, M. (Ed.) (2004). Semantically Linking and Browsing Provenance Logs for e-Science. In M. Bouzeghoub, C. A. Goble, V. Kashyap, & S. Spaccapietra (Eds.), First International IFIP Conference on Semantics of a Networked World. Semantics for Grid Databases (ICSNW 2004). (Vol. 3226, pp. 158-176). (LNCS). Springer Verlag. DOI: 10.1007/978-3-540-30145-5_10. Publication link: edb6e06a-d054-4b8a-9e1d-ae2ca0110eda
  • Bechhofer, S. (2004). OWL Web Ontology Language Parsing OWL in RDF/XML. (W3C Working group Note). http://www.w3.org/TR/owl-parsing/: World Wide Web Consortium.. Publication link: 725cc6fd-320e-4002-8ab5-17731dd382cb
  • Bechhofer, S., & Carroll, J. J. (2004). Parsing OWL DL: Trees or triples? In Thirteenth International World Wide Web Conference Proceedings, WWW2004|Thirteenth Int. World Wide Web Conf. Proc. WWW. (pp. 266-275). ACM. DOI: 10.1145/988672.988708. Publication link: 60fb10d0-fdf5-452d-8b2d-4aff8dedb818
  • Bechhofer, S., & Volz, R. (2004). Patching syntax in OWL ontologies. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 3298, pp. 668-682). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 2b7a8775-44d2-46e0-ada9-15f229c18434
  • Tsarkov, D., Riazanov, A., Bechhofer, S., & Horrocks, I. (2004). Using vampire to reason with OWL. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 3298, pp. 471-485). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 2dc04829-a92b-4732-8e53-5d6843496306
  • Horrocks, I., Li, L., Turi, D., Bechhofer, S., Haarslev, V. (Ed.), & Möller, R. (Ed.) (2004). The Instance Store: DL Reasoning with Large Numbers of Individuals. In V. Haarslev, & R. Möller (Eds.), Description Logics. (Vol. 104). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: 4d63be06-9a8e-4b04-9a36-671f758a64a3
  • Lord, P., Bechhofer, S., Wilkinson, M. D., Schiltz, G., Gessler, D., Hull, D., ... Stein, L. (2004). Applying Semantic Web Services to Bioinformatics: Experiences Gained, Lessons Learnt. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 3298, pp. 350-364). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 50bef667-e648-44cd-b94b-bb92f74e5a8d
  • Carr, L., Kampa, S., Hall, W., Bechhofer, S., Goble, C. A., Staab, S. (Ed.), & Studer, R. (Ed.) (2004). Ontologies and Hypertext. In Handbook on Ontologies. (pp. 517-532). (International Handbooks on Information Systems). Springer Verlag. . Publication link: 4f3de268-a8e2-44d7-9e12-dbe6e37bff67
  • Zhao, J., Goble, C. (Ed.), Stevens, R., Bechhofer, S., Bouzeghoub, M. (Ed.), Kashyap, V. (Ed.), & Spaccapietra, S. (Ed.) (2004). Semantically Linking and Browsing Provenance Logs for E-science. In M. Bouzeghoub, C. A. Goble, V. Kashyap, & S. Spaccapietra (Eds.), ICSNW. (Vol. 3226, pp. 158-176). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 01d3e605-c456-4b11-8bb1-36a37aa6dd64

2003

  • Stevens, R., Wroe, C., Bechhofer, S., Lord, P., Rector, A., & Goble, C. (2003). Building ontologies in DAML + OIL. Comparative and Functional Genomics, 4(1), 133-141. DOI: 10.1002/cfg.233. Publication link: d7ec0b7c-29c5-4766-ade3-9ce0523bfe9e
  • Bechhofer, S., Volz, R., & Lord, P. (2003). Cooking the Semantic Web with the OWL API. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 2870, pp. 659-675). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: d739faa7-5018-4f41-9225-8a27a261bcd7
  • Stevens, R., Goble, C., Paton, N. W., Bechhofer, S., Ng, G., Baker, P., ... Critchlow, T. (Ed.) (2003). Complex Query Formulation Over Diverse Information Sources in TAMBIS. In Bioinformatics: Managing Scientific Data. (pp. 189-223). Morgan Kaufmann. . Publication link: 078853b7-313c-4e74-9d76-0755709524b8
  • Uschold, M., Clark, P., Dickey, F., Fung, C., Smith, S., Uczekaj, S., ... Horrocks, I. (2003). A semantic infosphere. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 2870, pp. 882-896). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 5a1dabe7-38a8-489e-b328-e0c99983b88b

2002

  • Stevens, R., Goble, C., Horrocks, I., & Bechhofer, S. (2002). Building a bioinformatics ontology using OIL. IEEE Transactions on Information Technology in Biomedicine, 6(2), 135-141. DOI: 10.1109/TITB.2002.1006301. Publication link: 3b44b67f-02c8-40b6-b00c-dca75fc64595
  • Bechhofer, S., Carr, L., Goble, C., Kampa, S., & Miles-Board, T. (2002). The semantics of semantic annotation. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 2519, pp. 1152-1167). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: a290884d-9697-4e67-b35a-cd48e9f09b4f
  • Stevens, R., Goble, C., Horrocks, I., & Bechhofer, S. (2002). Oiling the way to machine understandable bioinformatics resources. IEEE Transactions on Information Technology in Biomedicine, 6(2), 129-134. DOI: 10.1109/TITB.2002.1006300. Publication link: aeb4a7b8-7f7a-4c3c-961a-f9b28ab6308b

2001

  • Bechhofer, S., & Goble, C. (2001). Thesaurus construction through knowledge representation. Data and Knowledge Engineering, 37(1), 25-45. DOI: 10.1016/S0169-023X(00)00052-5. Publication link: c797185d-1993-40d1-9252-341642473635
  • Goble, C. A., Bechhofer, S., Carr, L., Roure, D. D., & Hall, W. (2001). Conceptual Open Hypermedia = The Semantic Web? In SemWeb.. Publication link: ce34aa6f-8e6a-4e84-94f0-204c6815cfa6
  • Bechhofer, S., Horrocks, I., Stevens, R., Goble, C. A. (Ed.), McGuinness, D. L. (Ed.), Möller, R. (Ed.), & Patel-Schneider, P. F. (Ed.) (2001). OilEd: a Reason-able Ontology Editor for the Semantic Web. In C. A. Goble, D. L. McGuinness, R. Möller, & P. F. Patel-Schneider (Eds.), Description Logics. (Vol. 49). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: e52cc8ec-dc31-4ec2-931c-e8b75047d76b
  • Bechhofer, S., Goble, C. A., Horrocks, I., Cruz, I. F. (Ed.), Decker, S. (Ed.), Euzenat, J. (Ed.), & McGuinness, D. L. (Ed.) (2001). DAML+OIL is not Enough. In I. F. Cruz, S. Decker, J. Euzenat, & D. L. McGuinness (Eds.), SWWS. (pp. 151-159). Publication link: a7176161-7c09-4a44-8f8e-ae53275fb565
  • Bechhofer, S., Horrocks, I., Goble, C., & Stevens, R. (2001). {OilEd}: {A} {R}eason-able {O}ntology {E}ditor for the {S}emantic {W}eb. In Working Notes of the 2001 International Description Logics Workshop (DL-2001). (Vol. 49, pp. 1-9). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: 8df72534-91e5-4376-8d5b-5aa96a8d026c
  • Carr, L., Bechhofer, S., Goble, C., & Hall, W. (2001). Conceptual linking: ontology-based open hypermedia. In Proceedings 10th World Wide Web Conference.. Publication link: 9724c45c-ad92-4772-aab1-e3a2159d9cf2
  • Bechhofer, S., Horrocks, I., Goble, C., & Stevens, R. (2001). {OilEd}: {A} {R}eason-able {O}ntology {E}ditor for the {S}emantic {W}eb. In Proceedings of the Joint German/Austrian Conference on Artificial Intelligence: Advances in Artificial Intelligence (KI) 2001. (Vol. 2174, pp. 396-408). (LNCS). Springer Verlag. DOI: 10.1007/3-540-45422-5_28. Publication link: 7601e584-16db-428b-afcf-2fc02ebe478c
  • Goble, C. A., Stevens, R., Ng, G., Bechhofer, S., Paton, N. W., Baker, P. G., ... Brass, A. (2001). Transparent access to multiple bioinformatics information sources. IBM Systems Journal, 40(2), 532-551. DOI: 10.1147/sj.402.0532. Publication link: 3b9daaba-293d-47c9-95db-d4e1d20f7e90

2000

  • Stevens, R., Baker, P., Bechhofer, S., Ng, G., Jacoby, A., Paton, N. W., ... Brass, A. (2000). {TAMBIS}: {T}ransparent {A}ccess to {M}ultiple {B}ioinformatics {I}nformation {S}ources. Bioinformatics, 16(2), 184-186. DOI: 10.1093/bioinformatics/16.2.184. Publication link: 5f3d17d4-74c8-4b66-8bb0-f0432fd1840b | PubMed:0010842744
  • Paton, N. W., Goble, C. A., & Bechhofer, S. (2000). Knowledge based information integration systems. Information and Software Technology, 42(5), 299-312. DOI: 10.1016/S0950-5849(99)00090-7. Publication link: 7ff69a45-59fc-4fd3-a075-fb29a3073d8a
  • Bechhofer, S., Drummond, N., Goble, C. A., Ibrahim, M. T. (Ed.), Küng, J. (Ed.), & Revell, N. (Ed.) (2000). Supporting Public Browsing of an Art Gallery Collections Database. In M. T. Ibrahim, J. Küng, & N. Revell (Eds.), DEXA. (Vol. 1873, pp. 879-888). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 8d4e0981-0e72-4615-9fde-d245372cb9a0
  • Bechhofer, S., Horrocks, I., Baader, F. (Ed.), & Sattler, U. (Ed.) (2000). Driving User Interfaces from FaCT. In F. Baader, & U. Sattler (Eds.), Description Logics. (Vol. 33, pp. 45-54). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: 8cc0b662-c2e5-4d24-b37d-cc240b940049
  • Stevens, R., Goble, C., & Bechhofer, S. (2000). {O}ntology-based {K}nowledge {R}epresentation for {B}ioinformatics. Briefings in Bioinformatics, 1(4), 398-414. DOI: 10.1093/bib/1.4.398. Publication link: 4f103480-fc04-4c58-8569-8adb08d89f35
  • Stevens, R., Goble, C. A., & Bechhofer, S. (2000). Ontology-based knowledge representation for bioinformatics.Briefings in Bioinformatics, 1(4), 398-414. . Publication link: c3f5be60-33ca-4086-9a17-0f4fe11c3887

1999

  • Baker, P. G., Goble, C. A., Bechhofer, S., Paton, N. W., Stevens, R., & Brass, A. (1999). An ontology for bioinformatics applications. Bioinformatics, 15(6), 510-520. DOI: 10.1093/bioinformatics/15.6.510. Publication link: 46284412-8bf7-4a9b-893d-a42975dd2f8f
  • Stevens, R., Paton, N. W., Baker, P., Ng, G., Goble, C. A., Bechhofer, S., & Brass, A. (1999). TAMBIS online: a bioinformatics source integration tool. In Proceedings of the International Conference on Scientific and Statistical Database Management, SSDBM|Proc. Int. Conf. Sci. Stat. Database Manage. SSDBM. (pp. 280). Los Alamitos, CA, United States: IEEE. DOI: 10.1109/SSDM.1999.787647. Publication link: 3d7085d9-66b1-4207-9012-2cf09d742f1b
  • Goble, C., & Bechhofer, S. (1999). "Fetch me a picture representing triumph or similar": Classification based navigation and retrieval for picture archives. In IEE Colloquium (Digest)|IEE Colloq Dig. (pp. 17-20). (IFIP Conference Proceedings). Kluwer. . Publication link: 3ad565b3-40e2-48c9-87f8-ab9c79e4c0d7
  • Paton, N. W., Stevens, R., Baker, P. G., Goble, C., Bechhofer, S., Brass, A., & Ozsoyoglo, Z. M. E. A. (Ed.) (1999). {Q}uery {P}rocessing in the {TAMBIS} {B}ioinformatics {S}ource {I}ntegration {S}ystem. In Z. M. E. A. Ozsoyoglo (Ed.), Proceedings of the Eleventh International Conference on Scientific and Statistical Database Management (SSDBM). (pp. 138-147). {IEEE} Press. DOI: 10.1109/SSDM.1999.787629. Publication link: 72cc75c2-ea74-47d3-b161-d6089873ec39
  • Paton, N. W., Stevens, R., Baker, P., Goble, C. A., Bechhofer, S., & Brass, A. (1999). Query processing in the TAMBIS bioinformatics source integration system. In Proceedings of the International Conference on Scientific and Statistical Database Management, SSDBM|Proc. Int. Conf. Sci. Stat. Database Manage. SSDBM. (pp. 138-147). Los Alamitos, CA, United States: IEEE. . Publication link: 9e3b3cfc-55d7-4945-8718-9b7a50626b20
  • Stevens, R., Goble, C., Paton, N. W., Bechhofer, S., Ng, G., Baker, P., ... Rost, U. (Ed.) (1999). {C}omplex {Q}uery {F}ormulation {O}ver {D}iverse {I}nformation {S}ources {U}sing an {O}ntology. In E. {Bornberg-Bauer}, A. {De Beuckelaer}, U. Kummer, & U. Rost (Eds.), Workshop on Computation of Biochemical Pathways and Genetic Networks. (pp. 83-88). European Media Lab (EML). . Publication link: a3fc21f4-cf0f-4282-872a-bea0bd12299e
  • Bechhofer, S., Horrocks, I., Tessaris, S., Lambrix, P. (Ed.), Borgida, A. (Ed.), Lenzerini, M. (Ed.), ... Patel-Schneider, P. F. (Ed.) (1999). A Proposal for a Description Logic Interface. In P. Lambrix, A. Borgida, M. Lenzerini, R. Möller, & P. F. Patel-Schneider (Eds.), Description Logics. (Vol. 22). (CEUR Workshop Proceedings). CEUR-WS.org. . Publication link: ef21327f-4389-4df9-8fe0-f8e05bbcb8dd
  • Bechhofer, S., Stevens, R., Ng, G., Jacoby, A., & Goble, C. A. (1999). Guiding the User: An Ontology Driven Interface. In UIDIS. (pp. 158-161). Publication link: b6f91f3e-94a7-4220-b4d7-5d914679e191

1998

  • Baker, P. G., Brass, A., Bechhofer, S., Goble, C., Paton, N., & Stevens, R. (1998). TAMBIS--Transparent Access to Multiple Bioinformatics Information Sources. In Proceedings / ... International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology|Proc Int Conf Intell Syst Mol Biol. (Vol. 6, pp. 25-34). AAAI. . Publication link: 42cd5e03-aa04-4fee-9a3e-c4932f9bf96e

1997

  • Rector, A. L., Bechhofer, S., Goble, C. A., Horrocks, I., Nowlan, W. A., & Solomon, W. D. (1997). The GRAIL concept modelling language for medical terminology. Artificial Intelligence in Medicine, 9(2), 139-171. DOI: 10.1016/S0933-3657(96)00369-7. Publication link: 7e72cc2b-7d3a-4995-b26e-dc03ec3e51eb
  • Bechhofer, S., Goble, C. A., Brachman, R. J. (Ed.), Donini, F. M. (Ed.), Franconi, E. (Ed.), Horrocks, I. (Ed.), ... Rousset, M-C. (Ed.) (1997). Using a DL to Drive Query Interfaces. In R. J. Brachman, F. M. Donini, E. Franconi, I. Horrocks, A. Y. Levy, & M-C. Rousset (Eds.), Description Logics. (Vol. 410). (URA-CNRS).. Publication link: 6b6b8533-7256-445e-80f8-ae80d48fb9fd

1996

  • Goble, C. A., Haul, C., & Bechhofer, S. (1996). Describing and classifying multimedia using the description logic GRAIL. In I. K. Sethi, & R. C. Jain (Eds.), Proceedings of SPIE - The International Society for Optical Engineering|Proc SPIE Int Soc Opt Eng. (Vol. 2670, pp. 132-143). Publication link: 6855ddf1-eea9-4531-aab7-b9d42d4fe58a