In April 2016 Manchester eScholar was replaced by the University of Manchester’s new Research Information Management System, Pure. In the autumn the University’s research outputs will be available to search and browse via a new Research Portal. Until then the University’s full publication record can be accessed via a temporary portal and the old eScholar content is available to search and browse via this archive.

Fundamentals of Spectroscopic and Spectrometric Cellular Analysis

Jackson, Edward Robert James

[Thesis]. Manchester, UK: The University of Manchester; 2011.

Access to files

Abstract

Time-of-flight secondary ion mass spectrometry (ToF-SIMS) in principle has the capability to detect and localise complex chemistry on the sub-cellular scale. Robust sample preparation protocols are therefore of great importance when attempting to preserve the natural biochemistry and architecture of biological specimens and extract meaningful information. It is likely that the optimum methodology will depend on the nature of the sample, and the goal of the analysis. The following study focussed on the preparation of cancer cells for ToF-SIMS analysis. Air drying, freeze fracturing, freeze drying and cytospinning-based preparation techniques and variations thereof were evaluated. Using image contrast, assessing spectra for the gain, or loss of native and non-native cellular species and the ratio of inorganic to organic ion yields, the investigation provides a systematic evaluation of the features of each preparation technique. This study then employed the optimum methods to determine the influence of the various phases of the cell cycle on classification of ToF-SIMS spectral data. A number of cell types, both cancerous and non-cancerous in G1, S and G2/M growth phases are separated by anticancer drug treatment and FACS (fluorescence activated cell sorting) and subjected to ToF-SIMS analysis. The results indicate that ToF-SIMS can detect surface biochemical changes induced by the cell cycle. Importantly it is also capable of detecting subtle alterations in cellular chemistry caused by anticancer drugs. Furthermore, the ToF-SIMS data was compared to results obtained from synchrotron sourced FTIR microspectroscopy to provide a more robust complementary analysis and support chemical evidence gathered.

Bibliographic metadata

Type of resource:
Content type:
Form of thesis:
Type of submission:
Degree type:
Doctor of Philosophy
Degree programme:
PhD Chemical Engineering & Analytical Science (42 month)
Publication date:
Location:
Manchester, UK
Total pages:
158
Abstract:
Time-of-flight secondary ion mass spectrometry (ToF-SIMS) in principle has the capability to detect and localise complex chemistry on the sub-cellular scale. Robust sample preparation protocols are therefore of great importance when attempting to preserve the natural biochemistry and architecture of biological specimens and extract meaningful information. It is likely that the optimum methodology will depend on the nature of the sample, and the goal of the analysis. The following study focussed on the preparation of cancer cells for ToF-SIMS analysis. Air drying, freeze fracturing, freeze drying and cytospinning-based preparation techniques and variations thereof were evaluated. Using image contrast, assessing spectra for the gain, or loss of native and non-native cellular species and the ratio of inorganic to organic ion yields, the investigation provides a systematic evaluation of the features of each preparation technique. This study then employed the optimum methods to determine the influence of the various phases of the cell cycle on classification of ToF-SIMS spectral data. A number of cell types, both cancerous and non-cancerous in G1, S and G2/M growth phases are separated by anticancer drug treatment and FACS (fluorescence activated cell sorting) and subjected to ToF-SIMS analysis. The results indicate that ToF-SIMS can detect surface biochemical changes induced by the cell cycle. Importantly it is also capable of detecting subtle alterations in cellular chemistry caused by anticancer drugs. Furthermore, the ToF-SIMS data was compared to results obtained from synchrotron sourced FTIR microspectroscopy to provide a more robust complementary analysis and support chemical evidence gathered.
Thesis main supervisor(s):
Language:
en

Institutional metadata

University researcher(s):

Record metadata

Manchester eScholar ID:
uk-ac-man-scw:120043
Created by:
Jackson, Edward
Created:
15th March, 2011, 16:34:55
Last modified by:
Jackson, Edward
Last modified:
2nd June, 2011, 18:33:58

Can we help?

The library chat service will be available from 11am-3pm Monday to Friday (excluding Bank Holidays). You can also email your enquiry to us.